BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036B09SP1|AL430183
(909 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1789 955 0.0
>3x_Contig1789
Length = 30977
Score = 955 bits (481), Expect = 0.0
Identities = 521/533 (97%), Gaps = 2/533 (0%)
Strand = Plus / Minus
Query: 378 aaggttcctctcctttaattgamatatgtggaattgtcaccaaacattggaaagctgaca 437
|||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 9306 aaggttcctctcctttaattgacatatgtggaattgaaaccaaacattggaaagctgaca 9247
Query: 438 tttctgttatgctgcattatattggrggaggagcgtgggggcatcccgtttggaggggta 497
|||||||||||||||||||| | | ||||||||||| |||||||||||||||||||
Sbjct: 9246 tttctgttatgctgcattatctaaaaagcggagcgtgggg-catcccgtttggaggggta 9188
Query: 498 ttcgattgtgaatccgacattggaaccatattagatccattgagaattcccggtaaagat 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9187 ttcgattgtgaatccgacattggaaccatattagatccattgagaattcccggtaaagat 9128
Query: 558 acaaatgatgattgggacatattggaagtcaaccctggttgacttggagttgggaacc-a 616
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9127 acaaatgatgattgggacatattggaagtcaaccctggttgacttggagttgggaaccca 9068
Query: 617 tacatcatagagctatttgattgtggtgttgggtattgtgagtccatgtacatcggagct 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9067 tacatcatagagctatttgattgtggtgttgggtattgtgagtccatgtacatcggagct 9008
Query: 677 ggcatgttagcaacattatttgaggagaaatgcaaattggagttcattaataatggttgc 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9007 ggcatgttagcaacattatttgaggagaaatgcaaattggagttcattaataatggttgc 8948
Query: 737 tgcatgctttgattgttcaaatactgatcaagatgaggttgttgatgttccggtgccggt 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8947 tgcatgctttgattgttcaaatactgatcaagatgaggttgttgatgttccggtgccggt 8888
Query: 797 ggttgcaactgttgaaatggcggtggctgttgtgtttgcattgaataatcatgttgagaa 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8887 ggttgcaactgttgaaatggcggtggctgttgtgtttgcattgaataatcatgttgagaa 8828
Query: 857 gccattggcatctgcggaacattctgttgataaggtgggagtgtcatctgttg 909
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8827 gccattggcatctgcggaacattctgttgataaggtgggagtgtcatctgttg 8775
Score = 643 bits (324), Expect = 0.0
Identities = 334/336 (99%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 2 gatcccacaattaataccttggtattctatttttttttcctttttagtgcagtttaaaaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9686 gatcccacaattaataccttggtattctatttttttttcctttttagtgcagtttaaaaa 9627
Query: 62 tgcttaataaaacaacctgttaccattcagaatgacattcataagtcgtgacctatttcc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9626 tgcttaataaaacaacctgttaccattcagaatgacattcataagtcgtgacctatttcc 9567
Query: 122 cctgtgtataaaataaattttgtatttccatagaatcgactatccatcagataaagacaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9566 cctgtgtataaaataaattttgtatttccatagaatcgactatccatcagataaagacaa 9507
Query: 182 aaaaaatgaaaaatctaaaggaaaagtaagattgatggtagaatcaaaaacttgtaacaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9506 aaaaaatgaaaaatctaaaggaaaagtaagattgatggtagaatcaaaaacttgtaacaa 9447
Query: 242 atatttcatcatgaattcggaaatgttttaaacaatttgatgactgcatgcatccttctc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9446 atatttcatcatgaattcggaaatgttttaaacaatttgatgactgcatgcatccttctc 9387
Query: 302 gcttctttcttctg-tggtattttttttttagttta 336
|||||||||||||| ||||||||||||||| |||||
Sbjct: 9386 gcttctttcttctgatggtattttttttttcgttta 9351
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,167
Number of Sequences: 1807
Number of extensions: 10167
Number of successful extensions: 115
Number of sequences better than 1.0e-20: 1
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)